Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cul4aQ3TCH7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cul4aQ3TCH7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cul4aQ3TCH7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Gm11249-201ENSMUST00000117071 859 ntBASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cul4aQ3TCH7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cul4aQ3TCH7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cul4aQ3TCH7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms