Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim63Q38HM4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim63Q38HM4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim63Q38HM4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Gm9806-201ENSMUST00000051080 552 ntBASIC14.36□□□□□ -0.11
Trim63Q38HM4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim63Q38HM4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.35□□□□□ -0.11
Trim63Q38HM4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Scarna2-201ENSMUST00000157560 414 ntBASIC14.35□□□□□ -0.11
Trim63Q38HM4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Gm16437-201ENSMUST00000025669 507 ntBASIC14.35□□□□□ -0.11
Trim63Q38HM4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim63Q38HM4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim63Q38HM4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms