Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ssrp1Q08943 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.27■□□□□ 0.68
Ssrp1Q08943 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssrp1Q08943 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssrp1Q08943 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.26■□□□□ 0.67
Ssrp1Q08943 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.26■□□□□ 0.67
Ssrp1Q08943 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.26■□□□□ 0.67
Ssrp1Q08943 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.26■□□□□ 0.67
Ssrp1Q08943 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.26■□□□□ 0.67
Ssrp1Q08943 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssrp1Q08943 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.25■□□□□ 0.67
Ssrp1Q08943 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.25■□□□□ 0.67
Ssrp1Q08943 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssrp1Q08943 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.24■□□□□ 0.67
Ssrp1Q08943 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssrp1Q08943 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.23■□□□□ 0.67
Ssrp1Q08943 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Gm37292-201ENSMUST00000192062 758 ntBASIC19.23■□□□□ 0.67
Ssrp1Q08943 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssrp1Q08943 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Gm12382-201ENSMUST00000122005 922 ntBASIC19.22■□□□□ 0.67
Ssrp1Q08943 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssrp1Q08943 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.22■□□□□ 0.67
Ssrp1Q08943 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssrp1Q08943 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssrp1Q08943 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssrp1Q08943 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssrp1Q08943 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.21■□□□□ 0.67
Ssrp1Q08943 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssrp1Q08943 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
Ssrp1Q08943 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms