Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GabpaQ00422 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GabpaQ00422 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GabpaQ00422 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
GabpaQ00422 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Gm5587-201ENSMUST00000206270 674 ntBASIC19.7■□□□□ 0.74
GabpaQ00422 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GabpaQ00422 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.7■□□□□ 0.74
GabpaQ00422 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GabpaQ00422 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.7■□□□□ 0.74
GabpaQ00422 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GabpaQ00422 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.7■□□□□ 0.74
GabpaQ00422 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GabpaQ00422 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GabpaQ00422 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.69■□□□□ 0.74
GabpaQ00422 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.69■□□□□ 0.74
GabpaQ00422 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.69■□□□□ 0.74
GabpaQ00422 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
GabpaQ00422 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GabpaQ00422 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GabpaQ00422 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GabpaQ00422 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.68■□□□□ 0.74
GabpaQ00422 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GabpaQ00422 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GabpaQ00422 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.67■□□□□ 0.74
GabpaQ00422 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.67■□□□□ 0.74
GabpaQ00422 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.67■□□□□ 0.74
GabpaQ00422 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Gm10566-201ENSMUST00000086739 996 ntBASIC19.67■□□□□ 0.74
GabpaQ00422 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
GabpaQ00422 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Gm9013-201ENSMUST00000132939 882 ntBASIC19.66■□□□□ 0.74
GabpaQ00422 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
GabpaQ00422 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.66■□□□□ 0.74
GabpaQ00422 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.66■□□□□ 0.74
GabpaQ00422 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GabpaQ00422 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GabpaQ00422 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GabpaQ00422 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.65■□□□□ 0.74
GabpaQ00422 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.65■□□□□ 0.74
GabpaQ00422 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GabpaQ00422 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GabpaQ00422 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Actl10-202ENSMUST00000226583 1501 ntBASIC19.65■□□□□ 0.74
GabpaQ00422 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GabpaQ00422 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GabpaQ00422 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GabpaQ00422 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GabpaQ00422 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms