Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Npas1P97459 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Npas1P97459 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Npas1P97459 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Gm12821-201ENSMUST00000120022 600 ntBASIC14.54□□□□□ -0.08
Npas1P97459 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.54□□□□□ -0.08
Npas1P97459 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.54□□□□□ -0.08
Npas1P97459 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Npas1P97459 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Npas1P97459 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Npas1P97459 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Npas1P97459 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Npas1P97459 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.54□□□□□ -0.08
Npas1P97459 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Npas1P97459 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Npas1P97459 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Npas1P97459 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.53□□□□□ -0.08
Npas1P97459 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Npas1P97459 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Npas1P97459 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Npas1P97459 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Npas1P97459 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Npas1P97459 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Npas1P97459 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Npas1P97459 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Npas1P97459 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Npas1P97459 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Npas1P97459 Reep4-203ENSMUST00000226563 1444 ntBASIC14.52□□□□□ -0.08
Npas1P97459 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Npas1P97459 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Npas1P97459 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Npas1P97459 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Npas1P97459 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.52□□□□□ -0.09
Npas1P97459 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Npas1P97459 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Npas1P97459 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.52□□□□□ -0.09
Npas1P97459 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Npas1P97459 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Npas1P97459 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Gm43060-201ENSMUST00000200621 289 ntBASIC14.51□□□□□ -0.09
Npas1P97459 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Npas1P97459 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Npas1P97459 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.51□□□□□ -0.09
Npas1P97459 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Npas1P97459 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Npas1P97459 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Npas1P97459 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Npas1P97459 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.5□□□□□ -0.09
Npas1P97459 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Npas1P97459 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms