Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1aP97445 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1aP97445 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cacna1aP97445 Gm26039-201ENSMUST00000158152 144 ntBASIC15.94■□□□□ 0.14
Cacna1aP97445 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1aP97445 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Cacna1aP97445 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1aP97445 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1aP97445 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Cacna1aP97445 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1aP97445 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.93■□□□□ 0.14
Cacna1aP97445 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.93■□□□□ 0.14
Cacna1aP97445 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1aP97445 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.93■□□□□ 0.14
Cacna1aP97445 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1aP97445 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Cacna1aP97445 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1aP97445 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1aP97445 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1aP97445 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1aP97445 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1aP97445 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cacna1aP97445 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Cacna1aP97445 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cacna1aP97445 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.92■□□□□ 0.14
Cacna1aP97445 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cacna1aP97445 Gm15794-201ENSMUST00000120182 631 ntBASIC15.92■□□□□ 0.14
Cacna1aP97445 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cacna1aP97445 Notumos-201ENSMUST00000151998 2659 ntBASIC15.92■□□□□ 0.14
Cacna1aP97445 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Cacna1aP97445 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.91■□□□□ 0.14
Cacna1aP97445 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cacna1aP97445 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Cacna1aP97445 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
Cacna1aP97445 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cacna1aP97445 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cacna1aP97445 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.9■□□□□ 0.14
Cacna1aP97445 Gm29791-202ENSMUST00000207888 369 ntBASIC15.9■□□□□ 0.14
Cacna1aP97445 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cacna1aP97445 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.89■□□□□ 0.13
Cacna1aP97445 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.89■□□□□ 0.13
Cacna1aP97445 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cacna1aP97445 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.89■□□□□ 0.13
Cacna1aP97445 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Cacna1aP97445 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.89■□□□□ 0.13
Cacna1aP97445 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cacna1aP97445 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Mir770-201ENSMUST00000103252 94 ntBASIC15.88■□□□□ 0.13
Cacna1aP97445 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.88■□□□□ 0.13
Cacna1aP97445 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cacna1aP97445 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms