Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-3P97334 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-3P97334 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.85■■□□□ 1.09
Nkx2-3P97334 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-3P97334 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Nkx2-3P97334 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.84■■□□□ 1.09
Nkx2-3P97334 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx2-3P97334 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Gm34391-201ENSMUST00000203706 907 ntBASIC21.83■■□□□ 1.09
Nkx2-3P97334 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nkx2-3P97334 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Nkx2-3P97334 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx2-3P97334 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx2-3P97334 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Nkx2-3P97334 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx2-3P97334 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Wnt10b-204ENSMUST00000226655 1807 ntBASIC21.81■■□□□ 1.08
Nkx2-3P97334 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Gm18115-201ENSMUST00000221209 621 ntBASIC21.81■■□□□ 1.08
Nkx2-3P97334 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.81■■□□□ 1.08
Nkx2-3P97334 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.8■■□□□ 1.08
Nkx2-3P97334 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Phf7-203ENSMUST00000226565 1971 ntBASIC21.8■■□□□ 1.08
Nkx2-3P97334 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Nkx2-3P97334 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.8■■□□□ 1.08
Nkx2-3P97334 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx2-3P97334 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.8■■□□□ 1.08
Nkx2-3P97334 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.8■■□□□ 1.08
Nkx2-3P97334 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms