Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim43bP86448 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Gm12896-201ENSMUST00000118430 226 ntBASIC17.8■□□□□ 0.44
Trim43bP86448 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trim43bP86448 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim43bP86448 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim43bP86448 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43bP86448 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim43bP86448 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim43bP86448 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trim43bP86448 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trim43bP86448 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43bP86448 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim43bP86448 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim43bP86448 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Trim43bP86448 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim43bP86448 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim43bP86448 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim43bP86448 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43bP86448 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim43bP86448 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim43bP86448 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim43bP86448 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim43bP86448 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trim43bP86448 Gm22325-201ENSMUST00000158904 308 ntBASIC17.77■□□□□ 0.44
Trim43bP86448 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim43bP86448 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43bP86448 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43bP86448 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43bP86448 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43bP86448 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim43bP86448 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim43bP86448 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim43bP86448 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim43bP86448 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim43bP86448 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim43bP86448 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43bP86448 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.75■□□□□ 0.43
Trim43bP86448 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim43bP86448 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43bP86448 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms