Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Gm37292-201ENSMUST00000192062 758 ntBASIC15.22■□□□□ 0.03
Hist1h3bP84228 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.22■□□□□ 0.03
Hist1h3bP84228 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.22■□□□□ 0.03
Hist1h3bP84228 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.22■□□□□ 0.03
Hist1h3bP84228 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hist1h3bP84228 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.21■□□□□ 0.03
Hist1h3bP84228 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Hist1h3bP84228 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Gm5643-201ENSMUST00000117081 966 ntBASIC15.21■□□□□ 0.03
Hist1h3bP84228 Gm29257-201ENSMUST00000186115 639 ntBASIC15.21■□□□□ 0.03
Hist1h3bP84228 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hist1h3bP84228 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hist1h3bP84228 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hist1h3bP84228 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.2■□□□□ 0.02
Hist1h3bP84228 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.2■□□□□ 0.02
Hist1h3bP84228 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hist1h3bP84228 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.19■□□□□ 0.02
Hist1h3bP84228 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.19■□□□□ 0.02
Hist1h3bP84228 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hist1h3bP84228 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.19■□□□□ 0.02
Hist1h3bP84228 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hist1h3bP84228 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hist1h3bP84228 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms