Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Gm13158-201ENSMUST00000122007 736 ntBASIC19.04■□□□□ 0.64
Hmgb1P63158 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgb1P63158 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hmgb1P63158 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hmgb1P63158 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb1P63158 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmgb1P63158 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Hmgb1P63158 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb1P63158 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hmgb1P63158 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmgb1P63158 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hmgb1P63158 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgb1P63158 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmgb1P63158 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb1P63158 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hmgb1P63158 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgb1P63158 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.01■□□□□ 0.63
Hmgb1P63158 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmgb1P63158 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.01■□□□□ 0.63
Hmgb1P63158 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.01■□□□□ 0.63
Hmgb1P63158 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb1P63158 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmgb1P63158 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19■□□□□ 0.63
Hmgb1P63158 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Hmgb1P63158 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgb1P63158 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb1P63158 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19■□□□□ 0.63
Hmgb1P63158 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgb1P63158 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb1P63158 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmgb1P63158 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgb1P63158 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Hmgb1P63158 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms