Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.04■□□□□ 0.32
Lhx1P63006 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
Lhx1P63006 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Lhx1P63006 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Lhx1P63006 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lhx1P63006 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lhx1P63006 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.03■□□□□ 0.32
Lhx1P63006 Gm16061-201ENSMUST00000122167 857 ntBASIC17.03■□□□□ 0.32
Lhx1P63006 Gm13474-201ENSMUST00000122466 815 ntBASIC17.03■□□□□ 0.32
Lhx1P63006 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lhx1P63006 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.03■□□□□ 0.32
Lhx1P63006 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.03■□□□□ 0.32
Lhx1P63006 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.03■□□□□ 0.32
Lhx1P63006 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lhx1P63006 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lhx1P63006 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.02■□□□□ 0.32
Lhx1P63006 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lhx1P63006 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.02■□□□□ 0.32
Lhx1P63006 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lhx1P63006 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.02■□□□□ 0.32
Lhx1P63006 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx1P63006 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx1P63006 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Lhx1P63006 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lhx1P63006 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.01■□□□□ 0.31
Lhx1P63006 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
Lhx1P63006 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Mir5130-201ENSMUST00000175160 84 ntBASIC17.01■□□□□ 0.31
Lhx1P63006 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.01■□□□□ 0.31
Lhx1P63006 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lhx1P63006 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lhx1P63006 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Lhx1P63006 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lhx1P63006 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17■□□□□ 0.31
Lhx1P63006 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Lhx1P63006 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17■□□□□ 0.31
Lhx1P63006 Gm43182-201ENSMUST00000199476 2528 ntBASIC17■□□□□ 0.31
Lhx1P63006 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lhx1P63006 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.99■□□□□ 0.31
Lhx1P63006 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.99■□□□□ 0.31
Lhx1P63006 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.99■□□□□ 0.31
Lhx1P63006 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.99■□□□□ 0.31
Lhx1P63006 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lhx1P63006 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lhx1P63006 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lhx1P63006 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms