Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tubgcp3P58854 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.69■□□□□ 0.42
Tubgcp3P58854 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.69■□□□□ 0.42
Tubgcp3P58854 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubgcp3P58854 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.68■□□□□ 0.42
Tubgcp3P58854 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.68■□□□□ 0.42
Tubgcp3P58854 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tubgcp3P58854 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.67■□□□□ 0.42
Tubgcp3P58854 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.67■□□□□ 0.42
Tubgcp3P58854 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tubgcp3P58854 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.67■□□□□ 0.42
Tubgcp3P58854 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tubgcp3P58854 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tubgcp3P58854 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tubgcp3P58854 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tubgcp3P58854 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms