Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.35■□□□□ 0.69
Tpm1P58771 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.35■□□□□ 0.69
Tpm1P58771 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.35■□□□□ 0.69
Tpm1P58771 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.35■□□□□ 0.69
Tpm1P58771 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.35■□□□□ 0.69
Tpm1P58771 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tpm1P58771 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tpm1P58771 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Tpm1P58771 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tpm1P58771 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Tpm1P58771 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tpm1P58771 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Tpm1P58771 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm1P58771 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm1P58771 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm1P58771 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm1P58771 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tpm1P58771 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Tpm1P58771 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.33■□□□□ 0.69
Tpm1P58771 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm1P58771 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm1P58771 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Tpm1P58771 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm1P58771 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.33■□□□□ 0.68
Tpm1P58771 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tpm1P58771 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.33■□□□□ 0.68
Tpm1P58771 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tpm1P58771 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tpm1P58771 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.32■□□□□ 0.68
Tpm1P58771 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.31■□□□□ 0.68
Tpm1P58771 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.31■□□□□ 0.68
Tpm1P58771 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tpm1P58771 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tpm1P58771 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tpm1P58771 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm1P58771 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.29■□□□□ 0.68
Tpm1P58771 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms