Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.02□□□□□ -0.17
Sssca1P56873 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.02□□□□□ -0.17
Sssca1P56873 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.02□□□□□ -0.17
Sssca1P56873 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.02□□□□□ -0.17
Sssca1P56873 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Sssca1P56873 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sssca1P56873 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sssca1P56873 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sssca1P56873 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.01□□□□□ -0.17
Sssca1P56873 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Sssca1P56873 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.01□□□□□ -0.17
Sssca1P56873 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sssca1P56873 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sssca1P56873 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sssca1P56873 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14□□□□□ -0.17
Sssca1P56873 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Gm10418-201ENSMUST00000100943 576 ntBASIC14□□□□□ -0.17
Sssca1P56873 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14□□□□□ -0.17
Sssca1P56873 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Gm10033-202ENSMUST00000211874 928 ntBASIC14□□□□□ -0.17
Sssca1P56873 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14□□□□□ -0.17
Sssca1P56873 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14□□□□□ -0.17
Sssca1P56873 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14□□□□□ -0.17
Sssca1P56873 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sssca1P56873 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sssca1P56873 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.99□□□□□ -0.17
Sssca1P56873 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.99□□□□□ -0.17
Sssca1P56873 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sssca1P56873 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Sssca1P56873 Gm38285-201ENSMUST00000192928 922 ntBASIC13.99□□□□□ -0.17
Sssca1P56873 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.99□□□□□ -0.17
Sssca1P56873 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.99□□□□□ -0.17
Sssca1P56873 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Sssca1P56873 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.99□□□□□ -0.17
Sssca1P56873 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sssca1P56873 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.98□□□□□ -0.17
Sssca1P56873 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.98□□□□□ -0.17
Sssca1P56873 Mir8112-201ENSMUST00000184382 131 ntBASIC13.98□□□□□ -0.17
Sssca1P56873 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.98□□□□□ -0.17
Sssca1P56873 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sssca1P56873 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.98□□□□□ -0.17
Sssca1P56873 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sssca1P56873 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sssca1P56873 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sssca1P56873 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sssca1P56873 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms