Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rrp1P56183 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rrp1P56183 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.56■□□□□ 0.72
Rrp1P56183 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rrp1P56183 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rrp1P56183 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rrp1P56183 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rrp1P56183 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Gm10602-201ENSMUST00000098239 609 ntBASIC19.55■□□□□ 0.72
Rrp1P56183 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rrp1P56183 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.55■□□□□ 0.72
Rrp1P56183 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.54■□□□□ 0.72
Rrp1P56183 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rrp1P56183 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.54■□□□□ 0.72
Rrp1P56183 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Rrp1P56183 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.54■□□□□ 0.72
Rrp1P56183 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rrp1P56183 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rrp1P56183 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rrp1P56183 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Rrp1P56183 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Gm11643-201ENSMUST00000119578 864 ntBASIC19.53■□□□□ 0.72
Rrp1P56183 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.53■□□□□ 0.72
Rrp1P56183 Mtag2-201ENSMUST00000058665 714 ntBASIC19.53■□□□□ 0.72
Rrp1P56183 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.53■□□□□ 0.72
Rrp1P56183 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rrp1P56183 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rrp1P56183 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rrp1P56183 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.52■□□□□ 0.72
Rrp1P56183 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rrp1P56183 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rrp1P56183 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rrp1P56183 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rrp1P56183 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rrp1P56183 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rrp1P56183 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.51■□□□□ 0.71
Rrp1P56183 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rrp1P56183 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.51■□□□□ 0.71
Rrp1P56183 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rrp1P56183 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.51■□□□□ 0.71
Rrp1P56183 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rrp1P56183 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rrp1P56183 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.5■□□□□ 0.71
Rrp1P56183 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Rrp1P56183 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.5■□□□□ 0.71
Rrp1P56183 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.5■□□□□ 0.71
Rrp1P56183 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.5■□□□□ 0.71
Rrp1P56183 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Mir6349-201ENSMUST00000184059 97 ntBASIC19.5■□□□□ 0.71
Rrp1P56183 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.5■□□□□ 0.71
Rrp1P56183 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rrp1P56183 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.5■□□□□ 0.71
Rrp1P56183 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rrp1P56183 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rrp1P56183 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rrp1P56183 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.49■□□□□ 0.71
Rrp1P56183 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms