Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nub1P54729 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.61■□□□□ 0.57
Nub1P54729 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.61■□□□□ 0.57
Nub1P54729 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
Nub1P54729 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.61■□□□□ 0.57
Nub1P54729 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nub1P54729 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.6■□□□□ 0.57
Nub1P54729 Gm8969-201ENSMUST00000199694 526 ntBASIC18.6■□□□□ 0.57
Nub1P54729 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nub1P54729 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.6■□□□□ 0.57
Nub1P54729 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nub1P54729 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nub1P54729 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.59■□□□□ 0.57
Nub1P54729 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.59■□□□□ 0.57
Nub1P54729 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nub1P54729 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Nub1P54729 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.59■□□□□ 0.57
Nub1P54729 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Nub1P54729 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nub1P54729 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nub1P54729 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nub1P54729 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nub1P54729 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.58■□□□□ 0.56
Nub1P54729 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Nub1P54729 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nub1P54729 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Nub1P54729 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nub1P54729 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Nub1P54729 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.57■□□□□ 0.56
Nub1P54729 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Nub1P54729 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.57■□□□□ 0.56
Nub1P54729 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.57■□□□□ 0.56
Nub1P54729 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nub1P54729 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nub1P54729 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nub1P54729 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.56■□□□□ 0.56
Nub1P54729 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.56■□□□□ 0.56
Nub1P54729 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.56■□□□□ 0.56
Nub1P54729 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Nub1P54729 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nub1P54729 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms