Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.57■□□□□ 0.24
Sox3P53784 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.56■□□□□ 0.24
Sox3P53784 Gm45058-201ENSMUST00000205810 766 ntBASIC16.56■□□□□ 0.24
Sox3P53784 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sox3P53784 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Sox3P53784 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Sox3P53784 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox3P53784 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Gm42545-201ENSMUST00000202755 922 ntBASIC16.55■□□□□ 0.24
Sox3P53784 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.55■□□□□ 0.24
Sox3P53784 Gm7461-201ENSMUST00000058918 827 ntBASIC16.55■□□□□ 0.24
Sox3P53784 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sox3P53784 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox3P53784 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox3P53784 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.55■□□□□ 0.24
Sox3P53784 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sox3P53784 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox3P53784 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Gm37292-201ENSMUST00000192062 758 ntBASIC16.54■□□□□ 0.24
Sox3P53784 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.54■□□□□ 0.24
Sox3P53784 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.54■□□□□ 0.24
Sox3P53784 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox3P53784 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sox3P53784 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sox3P53784 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.53■□□□□ 0.24
Sox3P53784 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sox3P53784 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.53■□□□□ 0.24
Sox3P53784 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.53■□□□□ 0.24
Sox3P53784 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Sox3P53784 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sox3P53784 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox3P53784 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sox3P53784 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.52■□□□□ 0.24
Sox3P53784 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sox3P53784 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Sox3P53784 Gm15375-201ENSMUST00000119510 849 ntBASIC16.52■□□□□ 0.24
Sox3P53784 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms