Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.72■□□□□ 0.27
Lbx1P52955 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.72■□□□□ 0.27
Lbx1P52955 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.72■□□□□ 0.27
Lbx1P52955 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lbx1P52955 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lbx1P52955 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Lbx1P52955 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lbx1P52955 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.71■□□□□ 0.27
Lbx1P52955 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lbx1P52955 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lbx1P52955 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.71■□□□□ 0.27
Lbx1P52955 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.71■□□□□ 0.27
Lbx1P52955 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lbx1P52955 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.71■□□□□ 0.27
Lbx1P52955 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Lbx1P52955 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.7■□□□□ 0.26
Lbx1P52955 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lbx1P52955 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.7■□□□□ 0.26
Lbx1P52955 Gm14701-201ENSMUST00000117156 348 ntBASIC16.7■□□□□ 0.26
Lbx1P52955 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.7■□□□□ 0.26
Lbx1P52955 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lbx1P52955 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lbx1P52955 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.69■□□□□ 0.26
Lbx1P52955 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.69■□□□□ 0.26
Lbx1P52955 Gm43767-201ENSMUST00000198933 381 ntBASIC16.69■□□□□ 0.26
Lbx1P52955 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Lbx1P52955 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Lbx1P52955 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lbx1P52955 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.68■□□□□ 0.26
Lbx1P52955 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
Lbx1P52955 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lbx1P52955 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.68■□□□□ 0.26
Lbx1P52955 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.68■□□□□ 0.26
Lbx1P52955 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Lbx1P52955 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lbx1P52955 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Lbx1P52955 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.68■□□□□ 0.26
Lbx1P52955 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Lbx1P52955 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.67■□□□□ 0.26
Lbx1P52955 Gm25911-201ENSMUST00000157621 56 ntBASIC16.67■□□□□ 0.26
Lbx1P52955 Gm9727-201ENSMUST00000161387 555 ntBASIC16.67■□□□□ 0.26
Lbx1P52955 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.67■□□□□ 0.26
Lbx1P52955 Gm6089-201ENSMUST00000197666 938 ntBASIC16.67■□□□□ 0.26
Lbx1P52955 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.67■□□□□ 0.26
Lbx1P52955 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.67■□□□□ 0.26
Lbx1P52955 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.67■□□□□ 0.26
Lbx1P52955 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lbx1P52955 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms