Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdx1P52946 Mir5122-201ENSMUST00000175004 89 ntBASIC17.12■□□□□ 0.33
Pdx1P52946 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.12■□□□□ 0.33
Pdx1P52946 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.12■□□□□ 0.33
Pdx1P52946 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pdx1P52946 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.11■□□□□ 0.33
Pdx1P52946 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
Pdx1P52946 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.11■□□□□ 0.33
Pdx1P52946 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pdx1P52946 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.11■□□□□ 0.33
Pdx1P52946 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pdx1P52946 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pdx1P52946 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.1■□□□□ 0.33
Pdx1P52946 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.1■□□□□ 0.33
Pdx1P52946 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Timm23-208ENSMUST00000226683 750 ntBASIC17.1■□□□□ 0.33
Pdx1P52946 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pdx1P52946 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pdx1P52946 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pdx1P52946 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pdx1P52946 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pdx1P52946 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pdx1P52946 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.09■□□□□ 0.33
Pdx1P52946 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pdx1P52946 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdx1P52946 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.09■□□□□ 0.33
Pdx1P52946 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pdx1P52946 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pdx1P52946 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pdx1P52946 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Pdx1P52946 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pdx1P52946 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pdx1P52946 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pdx1P52946 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pdx1P52946 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.08■□□□□ 0.32
Pdx1P52946 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pdx1P52946 Gm38027-201ENSMUST00000192315 235 ntBASIC17.08■□□□□ 0.32
Pdx1P52946 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms