Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Lhx3P50481 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.56■□□□□ 0.4
Lhx3P50481 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.56■□□□□ 0.4
Lhx3P50481 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Lhx3P50481 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx3P50481 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx3P50481 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx3P50481 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lhx3P50481 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx3P50481 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.55■□□□□ 0.4
Lhx3P50481 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.55■□□□□ 0.4
Lhx3P50481 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Lhx3P50481 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.55■□□□□ 0.4
Lhx3P50481 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.55■□□□□ 0.4
Lhx3P50481 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.55■□□□□ 0.4
Lhx3P50481 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lhx3P50481 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.54■□□□□ 0.4
Lhx3P50481 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.54■□□□□ 0.4
Lhx3P50481 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lhx3P50481 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx3P50481 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.53■□□□□ 0.4
Lhx3P50481 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lhx3P50481 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.53■□□□□ 0.4
Lhx3P50481 Gm7370-201ENSMUST00000219471 767 ntBASIC17.53■□□□□ 0.4
Lhx3P50481 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx3P50481 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lhx3P50481 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lhx3P50481 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lhx3P50481 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lhx3P50481 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.52■□□□□ 0.4
Lhx3P50481 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lhx3P50481 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Gm10231-201ENSMUST00000181584 441 ntBASIC17.52■□□□□ 0.4
Lhx3P50481 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Gm10175-202ENSMUST00000208752 441 ntBASIC17.52■□□□□ 0.4
Lhx3P50481 Gm18959-201ENSMUST00000208954 655 ntBASIC17.52■□□□□ 0.4
Lhx3P50481 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Lhx3P50481 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.52■□□□□ 0.4
Lhx3P50481 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx3P50481 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Lhx3P50481 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx3P50481 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.52■□□□□ 0.39
Lhx3P50481 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx3P50481 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx3P50481 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.52■□□□□ 0.39
Lhx3P50481 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx3P50481 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lhx3P50481 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lhx3P50481 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx3P50481 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Gm13836-201ENSMUST00000121159 501 ntBASIC17.51■□□□□ 0.39
Lhx3P50481 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx3P50481 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.51■□□□□ 0.39
Lhx3P50481 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms