Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Krt6aP50446 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.22■□□□□ 0.35
Krt6aP50446 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.22■□□□□ 0.35
Krt6aP50446 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt6aP50446 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Krt6aP50446 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Krt6aP50446 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Krt6aP50446 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.21■□□□□ 0.35
Krt6aP50446 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Krt6aP50446 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Krt6aP50446 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Krt6aP50446 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Krt6aP50446 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Krt6aP50446 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.2■□□□□ 0.34
Krt6aP50446 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Krt6aP50446 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Krt6aP50446 Gm13148-201ENSMUST00000118892 745 ntBASIC17.2■□□□□ 0.34
Krt6aP50446 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Krt6aP50446 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.2■□□□□ 0.34
Krt6aP50446 Rab3c-203ENSMUST00000224180 967 ntBASIC17.2■□□□□ 0.34
Krt6aP50446 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Krt6aP50446 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.2■□□□□ 0.34
Krt6aP50446 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.2■□□□□ 0.34
Krt6aP50446 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Krt6aP50446 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.2■□□□□ 0.34
Krt6aP50446 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Krt6aP50446 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.19■□□□□ 0.34
Krt6aP50446 Gm13401-201ENSMUST00000117074 291 ntBASIC17.19■□□□□ 0.34
Krt6aP50446 Gm11927-201ENSMUST00000118472 759 ntBASIC17.19■□□□□ 0.34
Krt6aP50446 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Krt6aP50446 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Krt6aP50446 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Krt6aP50446 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.19■□□□□ 0.34
Krt6aP50446 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Krt6aP50446 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Krt6aP50446 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Krt6aP50446 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Krt6aP50446 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
Krt6aP50446 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.18■□□□□ 0.34
Krt6aP50446 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Krt6aP50446 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
Krt6aP50446 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.17■□□□□ 0.34
Krt6aP50446 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Krt6aP50446 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.17■□□□□ 0.34
Krt6aP50446 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.17■□□□□ 0.34
Krt6aP50446 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.17■□□□□ 0.34
Krt6aP50446 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.17■□□□□ 0.34
Krt6aP50446 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms