Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SftpbP50405 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SftpbP50405 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SftpbP50405 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SftpbP50405 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SftpbP50405 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.74■□□□□ 0.43
SftpbP50405 Mir8112-201ENSMUST00000184382 131 ntBASIC17.74■□□□□ 0.43
SftpbP50405 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SftpbP50405 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.74■□□□□ 0.43
SftpbP50405 Mtag2-201ENSMUST00000058665 714 ntBASIC17.74■□□□□ 0.43
SftpbP50405 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SftpbP50405 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SftpbP50405 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.74■□□□□ 0.43
SftpbP50405 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SftpbP50405 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.74■□□□□ 0.43
SftpbP50405 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SftpbP50405 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
SftpbP50405 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SftpbP50405 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SftpbP50405 Gm11927-201ENSMUST00000118472 759 ntBASIC17.73■□□□□ 0.43
SftpbP50405 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SftpbP50405 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SftpbP50405 Mir2861-201ENSMUST00000175539 82 ntBASIC17.73■□□□□ 0.43
SftpbP50405 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.73■□□□□ 0.43
SftpbP50405 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SftpbP50405 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SftpbP50405 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.73■□□□□ 0.43
SftpbP50405 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SftpbP50405 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Gm10418-201ENSMUST00000100943 576 ntBASIC17.72■□□□□ 0.43
SftpbP50405 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.72■□□□□ 0.43
SftpbP50405 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SftpbP50405 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.72■□□□□ 0.43
SftpbP50405 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SftpbP50405 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SftpbP50405 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SftpbP50405 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.71■□□□□ 0.43
SftpbP50405 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.71■□□□□ 0.43
SftpbP50405 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.71■□□□□ 0.43
SftpbP50405 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SftpbP50405 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.7■□□□□ 0.42
SftpbP50405 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SftpbP50405 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SftpbP50405 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms