Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rfx2P48379 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx2P48379 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx2P48379 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx2P48379 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rfx2P48379 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx2P48379 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx2P48379 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.14■□□□□ 0.5
Rfx2P48379 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx2P48379 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx2P48379 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Gm27463-201ENSMUST00000183569 57 ntBASIC18.14■□□□□ 0.49
Rfx2P48379 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.14■□□□□ 0.49
Rfx2P48379 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfx2P48379 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.14■□□□□ 0.49
Rfx2P48379 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx2P48379 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rfx2P48379 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Rfx2P48379 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.13■□□□□ 0.49
Rfx2P48379 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx2P48379 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.13■□□□□ 0.49
Rfx2P48379 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx2P48379 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
Rfx2P48379 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.12■□□□□ 0.49
Rfx2P48379 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.12■□□□□ 0.49
Rfx2P48379 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.12■□□□□ 0.49
Rfx2P48379 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.12■□□□□ 0.49
Rfx2P48379 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rfx2P48379 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rfx2P48379 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx2P48379 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.11■□□□□ 0.49
Rfx2P48379 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.11■□□□□ 0.49
Rfx2P48379 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.11■□□□□ 0.49
Rfx2P48379 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Gm8969-201ENSMUST00000199694 526 ntBASIC18.11■□□□□ 0.49
Rfx2P48379 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Rfx2P48379 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx2P48379 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfx2P48379 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.1■□□□□ 0.49
Rfx2P48379 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rfx2P48379 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Gm12085-201ENSMUST00000119263 940 ntBASIC18.1■□□□□ 0.49
Rfx2P48379 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx2P48379 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx2P48379 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx2P48379 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx2P48379 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx2P48379 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms