Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmx3P42581 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hmx3P42581 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hmx3P42581 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmx3P42581 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hmx3P42581 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.47□□□□□ -0.09
Hmx3P42581 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Hmx3P42581 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.47□□□□□ -0.09
Hmx3P42581 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.47□□□□□ -0.09
Hmx3P42581 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Hmx3P42581 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hmx3P42581 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hmx3P42581 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hmx3P42581 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmx3P42581 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.46□□□□□ -0.09
Hmx3P42581 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.46□□□□□ -0.09
Hmx3P42581 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Hmx3P42581 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.46□□□□□ -0.09
Hmx3P42581 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hmx3P42581 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hmx3P42581 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmx3P42581 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmx3P42581 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmx3P42581 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmx3P42581 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hmx3P42581 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.46□□□□□ -0.1
Hmx3P42581 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hmx3P42581 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Hmx3P42581 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.45□□□□□ -0.1
Hmx3P42581 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Hmx3P42581 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hmx3P42581 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hmx3P42581 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmx3P42581 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmx3P42581 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms