Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.36□□□□□ -0.11
Abca1P41233 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abca1P41233 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abca1P41233 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Abca1P41233 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abca1P41233 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Abca1P41233 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Abca1P41233 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Abca1P41233 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Gm28033-201ENSMUST00000184224 96 ntBASIC14.35□□□□□ -0.11
Abca1P41233 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Abca1P41233 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.35□□□□□ -0.11
Abca1P41233 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.35□□□□□ -0.11
Abca1P41233 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Abca1P41233 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Abca1P41233 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.35□□□□□ -0.11
Abca1P41233 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Abca1P41233 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Abca1P41233 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.34□□□□□ -0.11
Abca1P41233 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.34□□□□□ -0.11
Abca1P41233 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Abca1P41233 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Mir2861-201ENSMUST00000175539 82 ntBASIC14.34□□□□□ -0.11
Abca1P41233 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Abca1P41233 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Abca1P41233 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Abca1P41233 Gm16061-201ENSMUST00000122167 857 ntBASIC14.34□□□□□ -0.11
Abca1P41233 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Abca1P41233 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.33□□□□□ -0.11
Abca1P41233 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abca1P41233 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Abca1P41233 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Abca1P41233 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.33□□□□□ -0.12
Abca1P41233 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.33□□□□□ -0.12
Abca1P41233 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abca1P41233 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Abca1P41233 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Abca1P41233 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Abca1P41233 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.33□□□□□ -0.12
Abca1P41233 Gm27704-201ENSMUST00000185094 107 ntBASIC14.32□□□□□ -0.12
Abca1P41233 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Abca1P41233 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.32□□□□□ -0.12
Abca1P41233 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Abca1P41233 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Abca1P41233 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Abca1P41233 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Abca1P41233 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.31□□□□□ -0.12
Abca1P41233 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.31□□□□□ -0.12
Abca1P41233 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abca1P41233 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms