Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh4P39038 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdh4P39038 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cdh4P39038 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.56■□□□□ 0.24
Cdh4P39038 Gm37055-201ENSMUST00000191866 133 ntBASIC16.56■□□□□ 0.24
Cdh4P39038 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh4P39038 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdh4P39038 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.55■□□□□ 0.24
Cdh4P39038 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdh4P39038 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cdh4P39038 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.55■□□□□ 0.24
Cdh4P39038 Gm12085-201ENSMUST00000119263 940 ntBASIC16.55■□□□□ 0.24
Cdh4P39038 Mir6982-201ENSMUST00000184354 68 ntBASIC16.55■□□□□ 0.24
Cdh4P39038 Gm21814-202ENSMUST00000203277 873 ntBASIC16.55■□□□□ 0.24
Cdh4P39038 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cdh4P39038 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Cdh4P39038 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cdh4P39038 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.55■□□□□ 0.24
Cdh4P39038 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Cdh4P39038 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh4P39038 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cdh4P39038 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdh4P39038 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh4P39038 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Cdh4P39038 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdh4P39038 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.54■□□□□ 0.24
Cdh4P39038 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdh4P39038 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh4P39038 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdh4P39038 Gm24841-201ENSMUST00000158676 357 ntBASIC16.53■□□□□ 0.24
Cdh4P39038 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.53■□□□□ 0.24
Cdh4P39038 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.53■□□□□ 0.24
Cdh4P39038 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.53■□□□□ 0.24
Cdh4P39038 Gm5417-201ENSMUST00000079706 384 ntBASIC16.53■□□□□ 0.24
Cdh4P39038 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cdh4P39038 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cdh4P39038 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.53■□□□□ 0.24
Cdh4P39038 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh4P39038 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cdh4P39038 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cdh4P39038 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cdh4P39038 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Cdh4P39038 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh4P39038 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms