Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.24■□□□□ 0.35
LdlrP35951 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.24■□□□□ 0.35
LdlrP35951 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
LdlrP35951 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Gm27275-201ENSMUST00000184318 272 ntBASIC17.24■□□□□ 0.35
LdlrP35951 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Gm29791-202ENSMUST00000207888 369 ntBASIC17.24■□□□□ 0.35
LdlrP35951 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LdlrP35951 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.24■□□□□ 0.35
LdlrP35951 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LdlrP35951 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.24■□□□□ 0.35
LdlrP35951 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LdlrP35951 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LdlrP35951 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LdlrP35951 Gm13836-201ENSMUST00000121159 501 ntBASIC17.23■□□□□ 0.35
LdlrP35951 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.23■□□□□ 0.35
LdlrP35951 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.23■□□□□ 0.35
LdlrP35951 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LdlrP35951 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LdlrP35951 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.23■□□□□ 0.35
LdlrP35951 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LdlrP35951 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LdlrP35951 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LdlrP35951 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Haglr-201ENSMUST00000100000 2085 ntBASIC17.22■□□□□ 0.35
LdlrP35951 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LdlrP35951 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Gm5643-201ENSMUST00000117081 966 ntBASIC17.22■□□□□ 0.35
LdlrP35951 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.22■□□□□ 0.35
LdlrP35951 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.22■□□□□ 0.35
LdlrP35951 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.22■□□□□ 0.35
LdlrP35951 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LdlrP35951 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LdlrP35951 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LdlrP35951 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.22■□□□□ 0.35
LdlrP35951 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.21■□□□□ 0.35
LdlrP35951 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LdlrP35951 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.21■□□□□ 0.35
LdlrP35951 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.21■□□□□ 0.35
LdlrP35951 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LdlrP35951 Gm38285-201ENSMUST00000192928 922 ntBASIC17.21■□□□□ 0.35
LdlrP35951 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LdlrP35951 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LdlrP35951 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LdlrP35951 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LdlrP35951 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.21■□□□□ 0.34
LdlrP35951 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.2■□□□□ 0.34
LdlrP35951 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Gm6576-201ENSMUST00000169678 883 ntBASIC17.2■□□□□ 0.34
LdlrP35951 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.2■□□□□ 0.34
LdlrP35951 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LdlrP35951 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LdlrP35951 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LdlrP35951 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms