Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxa1P35582 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxa1P35582 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Foxa1P35582 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Foxa1P35582 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.01■□□□□ 0.15
Foxa1P35582 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Timm23-208ENSMUST00000226683 750 ntBASIC16.01■□□□□ 0.15
Foxa1P35582 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.01■□□□□ 0.15
Foxa1P35582 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Foxa1P35582 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Foxa1P35582 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Foxa1P35582 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Mir5122-201ENSMUST00000175004 89 ntBASIC16■□□□□ 0.15
Foxa1P35582 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Foxa1P35582 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16■□□□□ 0.15
Foxa1P35582 Otx2os1-204ENSMUST00000227221 751 ntBASIC16■□□□□ 0.15
Foxa1P35582 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16■□□□□ 0.15
Foxa1P35582 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Foxa1P35582 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
Foxa1P35582 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Foxa1P35582 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Foxa1P35582 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.99■□□□□ 0.15
Foxa1P35582 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.99■□□□□ 0.15
Foxa1P35582 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Foxa1P35582 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Foxa1P35582 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Foxa1P35582 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Foxa1P35582 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.98■□□□□ 0.15
Foxa1P35582 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.98■□□□□ 0.15
Foxa1P35582 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.98■□□□□ 0.15
Foxa1P35582 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.98■□□□□ 0.15
Foxa1P35582 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Foxa1P35582 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.98■□□□□ 0.15
Foxa1P35582 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Foxa1P35582 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.97■□□□□ 0.15
Foxa1P35582 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.97■□□□□ 0.15
Foxa1P35582 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.97■□□□□ 0.15
Foxa1P35582 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Foxa1P35582 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Foxa1P35582 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Foxa1P35582 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms