Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.01■□□□□ 0.15
Thbs1P35441 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.01■□□□□ 0.15
Thbs1P35441 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Trmt13-210ENSMUST00000198454 880 ntBASIC16.01■□□□□ 0.15
Thbs1P35441 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Thbs1P35441 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.01■□□□□ 0.15
Thbs1P35441 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.01■□□□□ 0.15
Thbs1P35441 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16■□□□□ 0.15
Thbs1P35441 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Thbs1P35441 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Thbs1P35441 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Thbs1P35441 Gm12382-201ENSMUST00000122005 922 ntBASIC16■□□□□ 0.15
Thbs1P35441 H2-K2-201ENSMUST00000174250 1049 ntBASIC16■□□□□ 0.15
Thbs1P35441 Gm37292-201ENSMUST00000192062 758 ntBASIC16■□□□□ 0.15
Thbs1P35441 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16■□□□□ 0.15
Thbs1P35441 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Thbs1P35441 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thbs1P35441 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Thbs1P35441 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.99■□□□□ 0.15
Thbs1P35441 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.99■□□□□ 0.15
Thbs1P35441 Gm4974-201ENSMUST00000209974 875 ntBASIC15.99■□□□□ 0.15
Thbs1P35441 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Thbs1P35441 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Thbs1P35441 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.98■□□□□ 0.15
Thbs1P35441 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Thbs1P35441 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.98■□□□□ 0.15
Thbs1P35441 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.98■□□□□ 0.15
Thbs1P35441 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.98■□□□□ 0.15
Thbs1P35441 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Thbs1P35441 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Thbs1P35441 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Thbs1P35441 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.97■□□□□ 0.15
Thbs1P35441 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.97■□□□□ 0.15
Thbs1P35441 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Thbs1P35441 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Thbs1P35441 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Thbs1P35441 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms