Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab5cP35278 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rab5cP35278 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Rab5cP35278 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.18□□□□□ -0.14
Rab5cP35278 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab5cP35278 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rab5cP35278 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab5cP35278 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.18□□□□□ -0.14
Rab5cP35278 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rab5cP35278 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.17□□□□□ -0.14
Rab5cP35278 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab5cP35278 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab5cP35278 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Rab5cP35278 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab5cP35278 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab5cP35278 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rab5cP35278 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab5cP35278 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rab5cP35278 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab5cP35278 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab5cP35278 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
Rab5cP35278 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rab5cP35278 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rab5cP35278 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab5cP35278 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Rab5cP35278 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab5cP35278 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms