Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.41■□□□□ 0.38
RxrbP28704 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RxrbP28704 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RxrbP28704 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.4■□□□□ 0.38
RxrbP28704 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RxrbP28704 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.4■□□□□ 0.38
RxrbP28704 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RxrbP28704 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RxrbP28704 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.4■□□□□ 0.38
RxrbP28704 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.4■□□□□ 0.38
RxrbP28704 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.38
RxrbP28704 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RxrbP28704 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RxrbP28704 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.39■□□□□ 0.37
RxrbP28704 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RxrbP28704 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.39■□□□□ 0.37
RxrbP28704 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.38■□□□□ 0.37
RxrbP28704 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.38■□□□□ 0.37
RxrbP28704 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RxrbP28704 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RxrbP28704 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RxrbP28704 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.37■□□□□ 0.37
RxrbP28704 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RxrbP28704 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
RxrbP28704 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.37■□□□□ 0.37
RxrbP28704 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RxrbP28704 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
RxrbP28704 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RxrbP28704 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RxrbP28704 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.36■□□□□ 0.37
RxrbP28704 Gm7290-201ENSMUST00000104990 617 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Gm12918-201ENSMUST00000120234 636 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Gm15710-201ENSMUST00000121821 636 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Gm18284-201ENSMUST00000172604 624 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.36■□□□□ 0.37
RxrbP28704 Gm5075-201ENSMUST00000196916 622 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.36■□□□□ 0.37
RxrbP28704 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RxrbP28704 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RxrbP28704 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RxrbP28704 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RxrbP28704 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.36■□□□□ 0.37
RxrbP28704 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms