Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nckap1P28660 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Nckap1P28660 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nckap1P28660 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Nckap1P28660 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.22■□□□□ 0.35
Nckap1P28660 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.22■□□□□ 0.35
Nckap1P28660 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Nckap1P28660 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Nckap1P28660 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nckap1P28660 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.21■□□□□ 0.35
Nckap1P28660 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nckap1P28660 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nckap1P28660 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Nckap1P28660 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.21■□□□□ 0.35
Nckap1P28660 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.21■□□□□ 0.35
Nckap1P28660 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Nckap1P28660 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.21■□□□□ 0.35
Nckap1P28660 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nckap1P28660 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Nckap1P28660 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nckap1P28660 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Nckap1P28660 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Nckap1P28660 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nckap1P28660 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Gm6345-202ENSMUST00000180900 204 ntBASIC17.2■□□□□ 0.34
Nckap1P28660 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nckap1P28660 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.2■□□□□ 0.34
Nckap1P28660 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nckap1P28660 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Rarb-207ENSMUST00000225921 2756 ntBASIC17.2■□□□□ 0.34
Nckap1P28660 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nckap1P28660 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nckap1P28660 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.19■□□□□ 0.34
Nckap1P28660 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nckap1P28660 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Nckap1P28660 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Gm33142-201ENSMUST00000193913 867 ntBASIC17.19■□□□□ 0.34
Nckap1P28660 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nckap1P28660 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Nckap1P28660 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nckap1P28660 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.19■□□□□ 0.34
Nckap1P28660 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nckap1P28660 Fst-202ENSMUST00000223640 2612 ntBASIC17.18■□□□□ 0.34
Nckap1P28660 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nckap1P28660 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms