Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pde6aP27664 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pde6aP27664 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Pde6aP27664 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6aP27664 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6aP27664 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6aP27664 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pde6aP27664 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Pde6aP27664 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.07■□□□□ 0.8
Pde6aP27664 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Gm15565-201ENSMUST00000118890 427 ntBASIC20.07■□□□□ 0.8
Pde6aP27664 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Pde6aP27664 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.07■□□□□ 0.8
Pde6aP27664 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
Pde6aP27664 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pde6aP27664 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6aP27664 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
Pde6aP27664 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.06■□□□□ 0.8
Pde6aP27664 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pde6aP27664 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Pde6aP27664 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6aP27664 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Pde6aP27664 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.05■□□□□ 0.8
Pde6aP27664 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.05■□□□□ 0.8
Pde6aP27664 Gm11539-201ENSMUST00000119837 557 ntBASIC20.05■□□□□ 0.8
Pde6aP27664 Gm13436-201ENSMUST00000120418 567 ntBASIC20.05■□□□□ 0.8
Pde6aP27664 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.05■□□□□ 0.8
Pde6aP27664 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pde6aP27664 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pde6aP27664 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6aP27664 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.04■□□□□ 0.8
Pde6aP27664 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pde6aP27664 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pde6aP27664 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Pde6aP27664 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.04■□□□□ 0.8
Pde6aP27664 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Il3ra-202ENSMUST00000223589 738 ntBASIC20.04■□□□□ 0.8
Pde6aP27664 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6aP27664 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pde6aP27664 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pde6aP27664 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.03■□□□□ 0.8
Pde6aP27664 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.03■□□□□ 0.8
Pde6aP27664 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.03■□□□□ 0.8
Pde6aP27664 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pde6aP27664 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.03■□□□□ 0.8
Pde6aP27664 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.03■□□□□ 0.8
Pde6aP27664 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.03■□□□□ 0.8
Pde6aP27664 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6aP27664 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.02■□□□□ 0.8
Pde6aP27664 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6aP27664 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms