Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.46□□□□□ -0.09
Col8a2P25318 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.46□□□□□ -0.09
Col8a2P25318 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col8a2P25318 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col8a2P25318 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col8a2P25318 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col8a2P25318 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col8a2P25318 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.45□□□□□ -0.1
Col8a2P25318 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.45□□□□□ -0.1
Col8a2P25318 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Col8a2P25318 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.45□□□□□ -0.1
Col8a2P25318 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col8a2P25318 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.44□□□□□ -0.1
Col8a2P25318 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.44□□□□□ -0.1
Col8a2P25318 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.44□□□□□ -0.1
Col8a2P25318 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.44□□□□□ -0.1
Col8a2P25318 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col8a2P25318 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.44□□□□□ -0.1
Col8a2P25318 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col8a2P25318 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.43□□□□□ -0.1
Col8a2P25318 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.43□□□□□ -0.1
Col8a2P25318 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Col8a2P25318 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col8a2P25318 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col8a2P25318 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.43□□□□□ -0.1
Col8a2P25318 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col8a2P25318 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Gm7370-201ENSMUST00000219471 767 ntBASIC14.42□□□□□ -0.1
Col8a2P25318 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col8a2P25318 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col8a2P25318 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col8a2P25318 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col8a2P25318 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.42□□□□□ -0.1
Col8a2P25318 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col8a2P25318 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.42□□□□□ -0.1
Col8a2P25318 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col8a2P25318 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.41□□□□□ -0.1
Col8a2P25318 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col8a2P25318 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms