Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.85■□□□□ 0.61
Pde6bP23440 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pde6bP23440 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.84■□□□□ 0.61
Pde6bP23440 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pde6bP23440 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.84■□□□□ 0.61
Pde6bP23440 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
Pde6bP23440 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pde6bP23440 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pde6bP23440 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pde6bP23440 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pde6bP23440 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.83■□□□□ 0.61
Pde6bP23440 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pde6bP23440 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pde6bP23440 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.83■□□□□ 0.6
Pde6bP23440 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pde6bP23440 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pde6bP23440 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Gm7791-201ENSMUST00000219066 539 ntBASIC18.83■□□□□ 0.6
Pde6bP23440 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.83■□□□□ 0.6
Pde6bP23440 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pde6bP23440 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Pde6bP23440 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.82■□□□□ 0.6
Pde6bP23440 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pde6bP23440 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.82■□□□□ 0.6
Pde6bP23440 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pde6bP23440 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.82■□□□□ 0.6
Pde6bP23440 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pde6bP23440 Fst-202ENSMUST00000223640 2612 ntBASIC18.82■□□□□ 0.6
Pde6bP23440 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pde6bP23440 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Pde6bP23440 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pde6bP23440 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pde6bP23440 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pde6bP23440 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Gm25016-201ENSMUST00000158399 131 ntBASIC18.81■□□□□ 0.6
Pde6bP23440 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pde6bP23440 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pde6bP23440 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pde6bP23440 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pde6bP23440 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pde6bP23440 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pde6bP23440 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pde6bP23440 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms