Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
BdnfP21237 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.59■□□□□ 0.25
BdnfP21237 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
BdnfP21237 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.59■□□□□ 0.25
BdnfP21237 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
BdnfP21237 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BdnfP21237 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BdnfP21237 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
BdnfP21237 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
BdnfP21237 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.58■□□□□ 0.24
BdnfP21237 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
BdnfP21237 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
BdnfP21237 Gm37179-201ENSMUST00000194862 823 ntBASIC16.58■□□□□ 0.24
BdnfP21237 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.58■□□□□ 0.24
BdnfP21237 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.58■□□□□ 0.24
BdnfP21237 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.58■□□□□ 0.24
BdnfP21237 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
BdnfP21237 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BdnfP21237 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
BdnfP21237 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.57■□□□□ 0.24
BdnfP21237 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
BdnfP21237 Gm26524-201ENSMUST00000192339 390 ntBASIC16.57■□□□□ 0.24
BdnfP21237 Gm29791-202ENSMUST00000207888 369 ntBASIC16.57■□□□□ 0.24
BdnfP21237 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.57■□□□□ 0.24
BdnfP21237 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
BdnfP21237 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.56■□□□□ 0.24
BdnfP21237 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.56■□□□□ 0.24
BdnfP21237 Gm38285-201ENSMUST00000192928 922 ntBASIC16.56■□□□□ 0.24
BdnfP21237 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
BdnfP21237 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.56■□□□□ 0.24
BdnfP21237 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
BdnfP21237 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
BdnfP21237 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.55■□□□□ 0.24
BdnfP21237 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.55■□□□□ 0.24
BdnfP21237 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.55■□□□□ 0.24
BdnfP21237 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.55■□□□□ 0.24
BdnfP21237 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.55■□□□□ 0.24
BdnfP21237 Rab3c-203ENSMUST00000224180 967 ntBASIC16.55■□□□□ 0.24
BdnfP21237 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Zfp783-201ENSMUST00000095946 670 ntBASIC16.55■□□□□ 0.24
BdnfP21237 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
BdnfP21237 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.55■□□□□ 0.24
BdnfP21237 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
BdnfP21237 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.54■□□□□ 0.24
BdnfP21237 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BdnfP21237 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms