Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfrsf9P20334 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Tnfrsf9P20334 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfrsf9P20334 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Tnfrsf9P20334 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfrsf9P20334 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfrsf9P20334 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfrsf9P20334 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfrsf9P20334 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Gm10013-201ENSMUST00000106074 672 ntBASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Gm3375-201ENSMUST00000203929 796 ntBASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Timm23-208ENSMUST00000226683 750 ntBASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfrsf9P20334 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Gm37292-201ENSMUST00000192062 758 ntBASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Gm10138-203ENSMUST00000206952 366 ntBASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Odf3b-204ENSMUST00000227834 930 ntBASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfrsf9P20334 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Gm15375-201ENSMUST00000119510 849 ntBASIC14.05□□□□□ -0.16
Tnfrsf9P20334 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Gm6345-202ENSMUST00000180900 204 ntBASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Zfp783-201ENSMUST00000095946 670 ntBASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tnfrsf9P20334 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms