Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Hmgn1P18608 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Mir2861-201ENSMUST00000175539 82 ntBASIC15.86■□□□□ 0.13
Hmgn1P18608 Gm10033-202ENSMUST00000211874 928 ntBASIC15.86■□□□□ 0.13
Hmgn1P18608 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.86■□□□□ 0.13
Hmgn1P18608 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.86■□□□□ 0.13
Hmgn1P18608 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.86■□□□□ 0.13
Hmgn1P18608 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hmgn1P18608 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Hmgn1P18608 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hmgn1P18608 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hmgn1P18608 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.84■□□□□ 0.13
Hmgn1P18608 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Hmgn1P18608 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.84■□□□□ 0.13
Hmgn1P18608 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hmgn1P18608 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Hmgn1P18608 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgn1P18608 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Hmgn1P18608 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgn1P18608 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgn1P18608 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgn1P18608 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hmgn1P18608 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Hmgn1P18608 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.83■□□□□ 0.12
Hmgn1P18608 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.83■□□□□ 0.12
Hmgn1P18608 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Hmgn1P18608 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.83■□□□□ 0.12
Hmgn1P18608 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.83■□□□□ 0.12
Hmgn1P18608 Gm18671-201ENSMUST00000214826 683 ntBASIC15.83■□□□□ 0.12
Hmgn1P18608 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.83■□□□□ 0.12
Hmgn1P18608 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.83■□□□□ 0.12
Hmgn1P18608 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hmgn1P18608 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Gm13401-201ENSMUST00000117074 291 ntBASIC15.82■□□□□ 0.12
Hmgn1P18608 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hmgn1P18608 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Flg-201ENSMUST00000050758 1488 ntBASIC15.82■□□□□ 0.12
Hmgn1P18608 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hmgn1P18608 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms