Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc6P10629 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc6P10629 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc6P10629 Fst-202ENSMUST00000223640 2612 ntBASIC19.23■□□□□ 0.67
Hoxc6P10629 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc6P10629 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hoxc6P10629 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc6P10629 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxc6P10629 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.22■□□□□ 0.67
Hoxc6P10629 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc6P10629 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc6P10629 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxc6P10629 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc6P10629 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.22■□□□□ 0.67
Hoxc6P10629 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.22■□□□□ 0.67
Hoxc6P10629 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.22■□□□□ 0.67
Hoxc6P10629 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc6P10629 Birc2-201ENSMUST00000054878 378 ntBASIC19.22■□□□□ 0.67
Hoxc6P10629 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxc6P10629 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.22■□□□□ 0.67
Hoxc6P10629 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxc6P10629 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hoxc6P10629 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.22■□□□□ 0.67
Hoxc6P10629 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Mir8112-201ENSMUST00000184382 131 ntBASIC19.21■□□□□ 0.67
Hoxc6P10629 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.21■□□□□ 0.67
Hoxc6P10629 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxc6P10629 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.2■□□□□ 0.66
Hoxc6P10629 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxc6P10629 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.2■□□□□ 0.66
Hoxc6P10629 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc6P10629 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.19■□□□□ 0.66
Hoxc6P10629 Gm15794-201ENSMUST00000120182 631 ntBASIC19.19■□□□□ 0.66
Hoxc6P10629 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Mzt1-203ENSMUST00000227948 952 ntBASIC19.19■□□□□ 0.66
Hoxc6P10629 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc6P10629 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.19■□□□□ 0.66
Hoxc6P10629 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc6P10629 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc6P10629 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.18■□□□□ 0.66
Hoxc6P10629 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc6P10629 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc6P10629 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxc6P10629 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc6P10629 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.17■□□□□ 0.66
Hoxc6P10629 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
Hoxc6P10629 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Hoxc6P10629 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hoxc6P10629 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc6P10629 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hoxc6P10629 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms