Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.4■□□□□ 0.38
Hoxa9P09631 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.4■□□□□ 0.38
Hoxa9P09631 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hoxa9P09631 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.39■□□□□ 0.38
Hoxa9P09631 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.39■□□□□ 0.37
Hoxa9P09631 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxa9P09631 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.39■□□□□ 0.37
Hoxa9P09631 Gm5587-201ENSMUST00000206270 674 ntBASIC17.39■□□□□ 0.37
Hoxa9P09631 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxa9P09631 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hoxa9P09631 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.38■□□□□ 0.37
Hoxa9P09631 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.38■□□□□ 0.37
Hoxa9P09631 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hoxa9P09631 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Hoxa9P09631 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.38■□□□□ 0.37
Hoxa9P09631 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hoxa9P09631 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hoxa9P09631 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hoxa9P09631 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.37■□□□□ 0.37
Hoxa9P09631 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Gm17661-201ENSMUST00000170317 270 ntBASIC17.37■□□□□ 0.37
Hoxa9P09631 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.37■□□□□ 0.37
Hoxa9P09631 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.37■□□□□ 0.37
Hoxa9P09631 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxa9P09631 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.36■□□□□ 0.37
Hoxa9P09631 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.36■□□□□ 0.37
Hoxa9P09631 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxa9P09631 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.35■□□□□ 0.37
Hoxa9P09631 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Ank2-226ENSMUST00000189368 339 ntBASIC17.35■□□□□ 0.37
Hoxa9P09631 Gm7213-201ENSMUST00000215977 950 ntBASIC17.35■□□□□ 0.37
Hoxa9P09631 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxa9P09631 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxa9P09631 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Gm9103-201ENSMUST00000119371 405 ntBASIC17.34■□□□□ 0.37
Hoxa9P09631 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxa9P09631 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms