Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
P01852 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.82■□□□□ 0.12
P01852 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
P01852 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Idnk-204ENSMUST00000226010 1898 ntBASIC15.82■□□□□ 0.12
P01852 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P01852 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
P01852 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.81■□□□□ 0.12
P01852 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
P01852 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
P01852 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.81■□□□□ 0.12
P01852 Odf3b-204ENSMUST00000227834 930 ntBASIC15.81■□□□□ 0.12
P01852 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.81■□□□□ 0.12
P01852 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P01852 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.8■□□□□ 0.12
P01852 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.8■□□□□ 0.12
P01852 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.8■□□□□ 0.12
P01852 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
P01852 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.8■□□□□ 0.12
P01852 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.8■□□□□ 0.12
P01852 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
P01852 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.8■□□□□ 0.12
P01852 Gm37055-201ENSMUST00000191866 133 ntBASIC15.8■□□□□ 0.12
P01852 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.8■□□□□ 0.12
P01852 Gm21814-202ENSMUST00000203277 873 ntBASIC15.8■□□□□ 0.12
P01852 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.8■□□□□ 0.12
P01852 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P01852 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.79■□□□□ 0.12
P01852 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
P01852 Mir6982-201ENSMUST00000184354 68 ntBASIC15.79■□□□□ 0.12
P01852 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.79■□□□□ 0.12
P01852 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.79■□□□□ 0.12
P01852 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
P01852 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
P01852 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P01852 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
P01852 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
P01852 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.78■□□□□ 0.12
P01852 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
P01852 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms