Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Yme1l1O88967 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Yme1l1O88967 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Yme1l1O88967 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Yme1l1O88967 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.11■□□□□ 0.49
Yme1l1O88967 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Yme1l1O88967 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.1■□□□□ 0.49
Yme1l1O88967 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.1■□□□□ 0.49
Yme1l1O88967 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.1■□□□□ 0.49
Yme1l1O88967 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.1■□□□□ 0.49
Yme1l1O88967 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Yme1l1O88967 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Yme1l1O88967 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.09■□□□□ 0.49
Yme1l1O88967 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Yme1l1O88967 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Yme1l1O88967 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Yme1l1O88967 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Gm28659-201ENSMUST00000188013 759 ntBASIC18.09■□□□□ 0.49
Yme1l1O88967 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.09■□□□□ 0.49
Yme1l1O88967 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Yme1l1O88967 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Yme1l1O88967 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Yme1l1O88967 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Olfr129-201ENSMUST00000122318 993 ntBASIC18.08■□□□□ 0.48
Yme1l1O88967 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Gm34391-201ENSMUST00000203706 907 ntBASIC18.08■□□□□ 0.48
Yme1l1O88967 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Yme1l1O88967 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Yme1l1O88967 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Yme1l1O88967 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Yme1l1O88967 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Golph3-205ENSMUST00000228671 2842 ntBASIC18.08■□□□□ 0.48
Yme1l1O88967 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Yme1l1O88967 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.07■□□□□ 0.48
Yme1l1O88967 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Yme1l1O88967 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.07■□□□□ 0.48
Yme1l1O88967 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Yme1l1O88967 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.07■□□□□ 0.48
Yme1l1O88967 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.06■□□□□ 0.48
Yme1l1O88967 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Yme1l1O88967 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Yme1l1O88967 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.06■□□□□ 0.48
Yme1l1O88967 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Yme1l1O88967 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.06■□□□□ 0.48
Yme1l1O88967 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Yme1l1O88967 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Yme1l1O88967 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Yme1l1O88967 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Yme1l1O88967 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Yme1l1O88967 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms