Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Syn1O88935 Gm8000-201ENSMUST00000188378 592 ntBASIC17.79■□□□□ 0.44
Syn1O88935 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.79■□□□□ 0.44
Syn1O88935 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syn1O88935 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Syn1O88935 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.78■□□□□ 0.44
Syn1O88935 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.78■□□□□ 0.44
Syn1O88935 Gm37025-201ENSMUST00000195159 829 ntBASIC17.78■□□□□ 0.44
Syn1O88935 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.78■□□□□ 0.44
Syn1O88935 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Syn1O88935 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Syn1O88935 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Syn1O88935 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Syn1O88935 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.77■□□□□ 0.44
Syn1O88935 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.77■□□□□ 0.44
Syn1O88935 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.77■□□□□ 0.44
Syn1O88935 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Syn1O88935 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Syn1O88935 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syn1O88935 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syn1O88935 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syn1O88935 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syn1O88935 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Syn1O88935 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.76■□□□□ 0.43
Syn1O88935 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.76■□□□□ 0.43
Syn1O88935 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.76■□□□□ 0.43
Syn1O88935 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Syn1O88935 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Syn1O88935 Actl10-202ENSMUST00000226583 1501 ntBASIC17.76■□□□□ 0.43
Syn1O88935 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syn1O88935 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Syn1O88935 Gm1401-201ENSMUST00000122048 772 ntBASIC17.75■□□□□ 0.43
Syn1O88935 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Syn1O88935 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Syn1O88935 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syn1O88935 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.74■□□□□ 0.43
Syn1O88935 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Syn1O88935 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.74■□□□□ 0.43
Syn1O88935 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.74■□□□□ 0.43
Syn1O88935 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Syn1O88935 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Syn1O88935 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Syn1O88935 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.73■□□□□ 0.43
Syn1O88935 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Syn1O88935 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Syn1O88935 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Syn1O88935 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syn1O88935 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.73■□□□□ 0.43
Syn1O88935 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.73■□□□□ 0.43
Syn1O88935 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms