Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Gm27704-201ENSMUST00000185094 107 ntBASIC18.28■□□□□ 0.52
Psmc3O88685 Gm5587-201ENSMUST00000206270 674 ntBASIC18.28■□□□□ 0.52
Psmc3O88685 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Psmc3O88685 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.28■□□□□ 0.52
Psmc3O88685 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.28■□□□□ 0.52
Psmc3O88685 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Psmc3O88685 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.27■□□□□ 0.52
Psmc3O88685 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.27■□□□□ 0.52
Psmc3O88685 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.27■□□□□ 0.52
Psmc3O88685 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Psmc3O88685 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Psmc3O88685 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Psmc3O88685 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Psmc3O88685 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Psmc3O88685 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Psmc3O88685 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Psmc3O88685 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Psmc3O88685 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Psmc3O88685 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Mir1668-201ENSMUST00000184114 107 ntBASIC18.26■□□□□ 0.51
Psmc3O88685 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.26■□□□□ 0.51
Psmc3O88685 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Psmc3O88685 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Psmc3O88685 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Psmc3O88685 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.25■□□□□ 0.51
Psmc3O88685 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.25■□□□□ 0.51
Psmc3O88685 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Psmc3O88685 Gm7213-201ENSMUST00000215977 950 ntBASIC18.25■□□□□ 0.51
Psmc3O88685 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Psmc3O88685 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Psmc3O88685 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Gm9013-201ENSMUST00000132939 882 ntBASIC18.24■□□□□ 0.51
Psmc3O88685 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Psmc3O88685 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.24■□□□□ 0.51
Psmc3O88685 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Psmc3O88685 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Psmc3O88685 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Psmc3O88685 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.23■□□□□ 0.51
Psmc3O88685 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Psmc3O88685 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.23■□□□□ 0.51
Psmc3O88685 Gm29518-201ENSMUST00000190858 372 ntBASIC18.23■□□□□ 0.51
Psmc3O88685 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms