Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a20bO88575 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20bO88575 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20bO88575 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.84■□□□□ 0.61
Slc6a20bO88575 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20bO88575 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20bO88575 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.83■□□□□ 0.6
Slc6a20bO88575 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.83■□□□□ 0.6
Slc6a20bO88575 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.83■□□□□ 0.6
Slc6a20bO88575 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20bO88575 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.82■□□□□ 0.6
Slc6a20bO88575 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20bO88575 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms