Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrp6O88572 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrp6O88572 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrp6O88572 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lrp6O88572 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lrp6O88572 Rprl3-201ENSMUST00000157400 290 ntBASIC22.53■■□□□ 1.2
Lrp6O88572 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Lrp6O88572 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.53■■□□□ 1.2
Lrp6O88572 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC22.52■■□□□ 1.2
Lrp6O88572 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC22.52■■□□□ 1.2
Lrp6O88572 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lrp6O88572 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Gm15920-201ENSMUST00000118998 402 ntBASIC22.51■■□□□ 1.19
Lrp6O88572 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC22.51■■□□□ 1.19
Lrp6O88572 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC22.51■■□□□ 1.19
Lrp6O88572 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC22.51■■□□□ 1.19
Lrp6O88572 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Lrp6O88572 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lrp6O88572 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Lrp6O88572 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Gm25990-201ENSMUST00000102440 86 ntBASIC22.5■■□□□ 1.19
Lrp6O88572 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Lrp6O88572 Gm9727-201ENSMUST00000161387 555 ntBASIC22.5■■□□□ 1.19
Lrp6O88572 Gm27321-201ENSMUST00000185021 205 ntBASIC22.5■■□□□ 1.19
Lrp6O88572 Gm43935-201ENSMUST00000203569 1050 ntBASIC22.5■■□□□ 1.19
Lrp6O88572 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.5■■□□□ 1.19
Lrp6O88572 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Lrp6O88572 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lrp6O88572 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrp6O88572 Gm13312-201ENSMUST00000119631 718 ntBASIC22.49■■□□□ 1.19
Lrp6O88572 Gm7230-201ENSMUST00000173026 815 ntBASIC22.49■■□□□ 1.19
Lrp6O88572 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC22.49■■□□□ 1.19
Lrp6O88572 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Lrp6O88572 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrp6O88572 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
Lrp6O88572 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lrp6O88572 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Lrp6O88572 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Lrp6O88572 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lrp6O88572 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.47■■□□□ 1.19
Lrp6O88572 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC22.47■■□□□ 1.19
Lrp6O88572 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Gm5648-201ENSMUST00000122244 1587 ntBASIC22.47■■□□□ 1.19
Lrp6O88572 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lrp6O88572 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lrp6O88572 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.46■■□□□ 1.19
Lrp6O88572 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC22.46■■□□□ 1.19
Lrp6O88572 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
Lrp6O88572 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.46■■□□□ 1.19
Lrp6O88572 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lrp6O88572 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lrp6O88572 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.46■■□□□ 1.19
Lrp6O88572 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.46■■□□□ 1.19
Lrp6O88572 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Lrp6O88572 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lrp6O88572 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Lrp6O88572 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lrp6O88572 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lrp6O88572 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.45■■□□□ 1.19
Lrp6O88572 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lrp6O88572 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lrp6O88572 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lrp6O88572 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Lrp6O88572 Gm15173-201ENSMUST00000122049 433 ntBASIC22.45■■□□□ 1.18
Lrp6O88572 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC22.45■■□□□ 1.18
Lrp6O88572 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC22.45■■□□□ 1.18
Lrp6O88572 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lrp6O88572 AC159114.1-201ENSMUST00000220349 266 ntBASIC22.45■■□□□ 1.18
Lrp6O88572 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms