Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.45■□□□□ 0.22
Tgfbr3O88393 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tgfbr3O88393 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tgfbr3O88393 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tgfbr3O88393 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.42■□□□□ 0.22
Tgfbr3O88393 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.42■□□□□ 0.22
Tgfbr3O88393 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tgfbr3O88393 Idnk-204ENSMUST00000226010 1898 ntBASIC16.42■□□□□ 0.22
Tgfbr3O88393 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Tgfbr3O88393 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tgfbr3O88393 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms