Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ttc3O88196 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ttc3O88196 Gm14859-201ENSMUST00000117752 357 ntBASIC18.17■□□□□ 0.5
Ttc3O88196 Gm11355-201ENSMUST00000121120 306 ntBASIC18.17■□□□□ 0.5
Ttc3O88196 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Ttc3O88196 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ttc3O88196 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.17■□□□□ 0.5
Ttc3O88196 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ttc3O88196 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Gm17971-201ENSMUST00000190239 806 ntBASIC18.16■□□□□ 0.5
Ttc3O88196 Gm17808-201ENSMUST00000200859 894 ntBASIC18.16■□□□□ 0.5
Ttc3O88196 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ttc3O88196 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ttc3O88196 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ttc3O88196 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ttc3O88196 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ttc3O88196 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ttc3O88196 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc3O88196 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc3O88196 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc3O88196 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ttc3O88196 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.14■□□□□ 0.49
Ttc3O88196 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ttc3O88196 Mir770-201ENSMUST00000103252 94 ntBASIC18.14■□□□□ 0.49
Ttc3O88196 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.14■□□□□ 0.49
Ttc3O88196 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ttc3O88196 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Ttc3O88196 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ttc3O88196 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.13■□□□□ 0.49
Ttc3O88196 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ttc3O88196 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ttc3O88196 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ttc3O88196 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.13■□□□□ 0.49
Ttc3O88196 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.13■□□□□ 0.49
Ttc3O88196 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.13■□□□□ 0.49
Ttc3O88196 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.13■□□□□ 0.49
Ttc3O88196 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ttc3O88196 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ttc3O88196 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.12■□□□□ 0.49
Ttc3O88196 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ttc3O88196 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ttc3O88196 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Gm27000-201ENSMUST00000182943 842 ntBASIC18.11■□□□□ 0.49
Ttc3O88196 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ttc3O88196 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ttc3O88196 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.11■□□□□ 0.49
Ttc3O88196 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms