Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC22.52■■□□□ 1.2
Ubr1O70481 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC22.52■■□□□ 1.2
Ubr1O70481 AC124569.2-201ENSMUST00000225998 818 ntBASIC22.52■■□□□ 1.2
Ubr1O70481 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubr1O70481 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubr1O70481 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr1O70481 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ubr1O70481 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr1O70481 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Ubr1O70481 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr1O70481 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr1O70481 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr1O70481 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ubr1O70481 Ighv6-1-201ENSMUST00000193612 343 ntBASIC22.5■■□□□ 1.19
Ubr1O70481 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC22.5■■□□□ 1.19
Ubr1O70481 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr1O70481 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr1O70481 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC22.5■■□□□ 1.19
Ubr1O70481 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Ubr1O70481 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC22.5■■□□□ 1.19
Ubr1O70481 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC22.5■■□□□ 1.19
Ubr1O70481 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr1O70481 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr1O70481 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr1O70481 Wnt10b-204ENSMUST00000226655 1807 ntBASIC22.5■■□□□ 1.19
Ubr1O70481 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC22.49■■□□□ 1.19
Ubr1O70481 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC22.49■■□□□ 1.19
Ubr1O70481 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr1O70481 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC22.49■■□□□ 1.19
Ubr1O70481 AC153889.1-201ENSMUST00000219257 330 ntBASIC22.49■■□□□ 1.19
Ubr1O70481 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr1O70481 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr1O70481 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr1O70481 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr1O70481 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr1O70481 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ubr1O70481 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC22.48■■□□□ 1.19
Ubr1O70481 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr1O70481 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC22.48■■□□□ 1.19
Ubr1O70481 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ubr1O70481 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr1O70481 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Ubr1O70481 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
Ubr1O70481 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC22.48■■□□□ 1.19
Ubr1O70481 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ubr1O70481 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC22.48■■□□□ 1.19
Ubr1O70481 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ubr1O70481 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.47■■□□□ 1.19
Ubr1O70481 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC22.47■■□□□ 1.19
Ubr1O70481 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr1O70481 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ubr1O70481 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC22.46■■□□□ 1.19
Ubr1O70481 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr1O70481 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ubr1O70481 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ubr1O70481 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC22.45■■□□□ 1.19
Ubr1O70481 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.19
Ubr1O70481 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
Ubr1O70481 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ubr1O70481 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ubr1O70481 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ubr1O70481 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr1O70481 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ubr1O70481 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Ubr1O70481 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC22.44■■□□□ 1.18
Ubr1O70481 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr1O70481 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.44■■□□□ 1.18
Ubr1O70481 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms