Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tnfaip1O70479 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.25■□□□□ 0.51
Tnfaip1O70479 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Mir8112-201ENSMUST00000184382 131 ntBASIC18.25■□□□□ 0.51
Tnfaip1O70479 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Mzt1-203ENSMUST00000227948 952 ntBASIC18.25■□□□□ 0.51
Tnfaip1O70479 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip1O70479 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tnfaip1O70479 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.24■□□□□ 0.51
Tnfaip1O70479 Idnk-204ENSMUST00000226010 1898 ntBASIC18.24■□□□□ 0.51
Tnfaip1O70479 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.23■□□□□ 0.51
Tnfaip1O70479 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.23■□□□□ 0.51
Tnfaip1O70479 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip1O70479 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip1O70479 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip1O70479 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Tnfaip1O70479 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms